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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs143671229 chr7:76291357 T/C POMZP3 chr7:76239303-76256578:- 0.99 5.94 2.38E-7 Box Plot
ACC rs143789342 chr2:99758020 G/GCGCAGGCGCACGCCCA TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs143964770 chr1:213086918 C/T LQK1 chr1:213029947-213031480:- 0.75 6.23 8.33E-8 Box Plot
ACC rs144070801 chr8:71666532 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.54 2.65E-8 Box Plot
ACC rs1443246 chr11:60130796 C/T MS4A14 chr11:60146003-60185229:+ 0.34 5.29 2.49E-6 Box Plot
ACC rs1443251 chr11:60166175 G/A MS4A14 chr11:60146003-60185229:+ 0.34 5.6 8.27E-7 Box Plot
ACC rs144349428 chr7:76305022 A/G POMZP3 chr7:76239303-76256578:- 0.99 5.94 2.38E-7 Box Plot
ACC rs144390890 chr6:86404523 TTTA/T SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs145178328 chr8:71632351 G/A XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs145309898 chr7:64968626 CTCA/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.42 1.55E-6 Box Plot
ACC rs1453563 chr2:99720267 C/G TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs145447649 chr7:64968887 T/TTCA INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.76E-6 Box Plot
ACC rs145542939 chr7:97412856 A/G TECPR1 chr7:97843936-97881563:- 0.83 5.33 2.18E-6 Box Plot
ACC rs145610880 chr7:98205906 CTGCCTTGCATCCTTGATG/ TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs145664366 chr7:76318377 C/CT POMZP3 chr7:76239303-76256578:- 0.99 5.91 2.64E-7 Box Plot